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Stool DNA Extraction Kit (STLD050, STLD100)

DNA Extraction/Genomic DNA Purification

The Presto™ Stool gDNA Extraction Kit is designed for rapid isolation of genomic DNA from microorganisms, such as bacteria and fungi in stool samples. The stool sample is homogenized and disrupted using a lysis buffer and ceramic beads. Insoluble particles, proteins and PCR inhibitors such as humic acid are then precipitated with a proprietary inhibitor removal buffer. Residual inhibitors are further removed by passing through a specialized PCR inhibitor removal column. Genomic DNA in the sample is then bound by the GD Column followed by wash and elution. DNA phenol extraction or alcohol precipitation is not required and the entire procedure can be completed within 50 minutes. The purified genomic DNA is ready for use in PCR, restriction enzyme digestion, and sequencing reactions.

DOCUMENTS

DESCRIPTION

Specifications (Cat. # STLD050, STLD100)

  • Purify genomic DNA from stool samples within 50 minutes!
  • Sample: 180-200 mg of fresh or frozen stool samples
  • Binding Capacity: 50 µg
  • High Quality DNA: A260/A280 = 1.8-2.0
  • Format: beadbeating tubes, inhibitor removal columns and spin columns
  • Elution Volume: 30-100 µl
  • Storage: dry at room temperature (15-25°C)

APPLICATIONS

PCR, AFLP/PADP, RFLP, Southern Blotting, Real-time PCR

COMPONENTS

  • ST1 Buffer
  • ST2 Buffer
  • ST3 Buffer
  • Wash Buffer
  • Elution Buffer (10 mM Tris-HCl, pH8.5 at 25ºC)
  • Inhibitor Removal Columns
  • GD Columns
  • Beadbeating Tubes Type C
  • 2 ml Centrifuge Tubes
  • 2 ml Collection Tubes

QUALITY CONTROL

The quality of the Presto™ Stool DNA Extraction Kit is tested on a lot-to-lot basis by isolating genomic DNA from 200 mg stool samples. Following the purification process, the purified genomic DNA (A260/A280 ratio between 1.8-2.0) is analyzed by electrophoresis.

Presto™ Stool DNA Extraction Kit Functional Test Data

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Figure 1 .Total DNA was purified from 150 mg of human stool samples which were frozen at -20ºC for 1 week and from 80 mg of rabbit stool samples which were stored at room temperature for 1 week using the Presto™ Stool DNA Extraction Kit. 5 µl aliquots of purified DNA from 100 µl eluates were analyzed on a 0.8% agarose gel.

M = Geneaid 1 Kb DNA Ladder
Lanes 1-2 = Human stool samples
Lanes 3-4 = Rabbit stool samples

 
Sample
ng/µl
Yield
260/280
260/230
1
127.1
12.7 µg
1.86
2.12
2
129.9
13.0 µg
1.87
2.22
3
77.6
7.7 µg
1.85
2.15
4
82.6
8.3 µg
1.85
2.15
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Figure 3 .5 μl of undiluted, purified DNA from human and rabbit stool, served as a template for amplification of a 1.5 kb fragment from the bacterial 16S rRNA gene. The extracted DNA works undiluted in a PCR reaction, indicating the successful removal of PCR inhibitors.

M = Geneaid 1 Kb DNA Ladder
Lanes 1-2 = Human stool samples
Lanes 3-4 = Rabbit stool samples

Genomic DNA Extraction Kits Specifications

 
SpecificationsgSYNC™ DNA Extraction KitGenomic DNA Mini Kit Blood Cultured CellGenomic DNA Mini Kit TissueGenomic DNA Mini/Maxi Kit PlantPresto™ Mini gDNA Bacteria KitPresto™ Mini gDNA Yeast KitGeneius™ Micro gDNA Extraction KitPresto™ Buccal Swab gDNA Extraction Kit
Cat. #GS100
GS300
GB100
GB300
GT050
GT100
GT300
GP100
GPM010
GPM020
GBB100/101
GBB300/301
GBYB100
GBYB300
GMB100
GMB300
GSK100
GSK300
FormatSpin ColumnSpin ColumnSpin ColumnSpin ColumnSpin ColumnSpin ColumnSpin ColumnSpin Column
Binding Capacity50 µg50 µg50 µg50 µg (Mini)
500 µg (Maxi)
50 µgN/A50 µg50 µg
Sample200 µl blood300 µl blood30 mg animal tissueMini: 100 mg plant tissue1x109 bacterial cells2x108 yeast cells1-100 µl bloodbuccal swabs
 20 mg animal tissue200 µl buffy coat Maxi: 1 g plant tissue200 µl blood FTA® Cards 
 1x107 cultured cells1x107 cultured cells  1 ml urine, plasma 1 ml urine 
 hair2x108 yeast/fungus    1-100 µl saliva 
MicropestleN/AN/AYesN/AN/AN/AN/AN/A
Filter ColumnN/AN/AN/AYesN/AN/AN/AYes
EnzymeProteinase KN/AProteinase KN/ALysozyme Proteinase KN/AProteinase KProteinase K
Typical Yield5 µg from
200 µl blood
4-10 µg from
300 µl blood
10-40 µg from
20 mg tissue
3-5 µg from 100 mg Arabidopsis leaf (Mini)37 µg from 1x109 E. coli10 µg from 2x108 S. cerevisiae cells300 ng from 6 mm blood spots2 µg per swab
 10-40 µg from
20 mg tissue
  80 µg from 500 mg Lemon leaf (Maxi)10-15 µg from 1x109 Bacillus subtilis   
Elution Volume30-100 µl30-200 µl30-200 µl30-200 µl (Mini)
1 ml (Maxi)
30-200 µl30-200 µl30-100 µl50-100 µl
Operation Time<20 minutes<25 minutes30 minutes<30 minutes<30 minutes<40 minutes<20 minutes<20 minutes

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